STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_04540Sugar (Glycoside-Pentoside-Hexuronide) transporter. (463 aa)    
Predicted Functional Partners:
C806_04541
Hypothetical protein; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.820
C806_04539
Hypothetical protein.
 
     0.809
uxaC
Hypothetical protein.
 
   
 0.792
C806_04538
beta-N-acetylhexosaminidase.
 
     0.789
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
   
 0.769
C806_00552
Hypothetical protein.
  
     0.728
C806_04645
Hypothetical protein.
  
     0.704
C806_03278
Hypothetical protein; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.669
C806_04535
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.568
C806_03280
Hypothetical protein.
  
     0.560
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.