STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_04570Hypothetical protein. (405 aa)    
Predicted Functional Partners:
C806_03952
Flagellar motor switch protein FliN.
  
  
 0.999
C806_03999
Two-component system, chemotaxis family, response regulator CheV.
  
  
 0.877
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.858
C806_03964
Flagellar protein export ATPase FliI.
  
  
 0.823
C806_03965
Hypothetical protein.
  
  
 0.823
C806_00656
Hypothetical protein.
  
  
 0.822
C806_03953
Flagellar motor switch protein FliM.
  
  
 0.822
C806_03960
Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein.
  
  
 0.822
C806_03967
Hypothetical protein.
  
  
 0.822
fliE
Flagellar hook-basal body complex protein FliE.
  
  
 0.822
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.