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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_04732Hypothetical protein. (292 aa)    
Predicted Functional Partners:
C806_03464
Hypothetical protein.
  
 0.771
C806_00980
Hypothetical protein.
  
 0.733
C806_04128
Lactoylglutathione lyase.
    
 0.645
C806_03682
Hypothetical protein.
  
 
   0.569
C806_02120
Hypothetical protein.
  
  
  0.556
C806_03608
Hypothetical protein.
  
  
  0.553
C806_03559
Hypothetical protein; Belongs to the TtcA family.
  
 0.526
C806_03143
Hypothetical protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
 0.494
C806_00576
Hypothetical protein.
   
 
 0.462
ybeY
YbeY/UPF0054 family metalloprotein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
 
 0.459
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.