STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_04848Phage tail tape measure protein, TP901 family, core region. (982 aa)    
Predicted Functional Partners:
C806_04846
Hypothetical protein.
 
     0.832
C806_04847
Hypothetical protein.
       0.790
C806_00768
Hypothetical protein.
 
     0.767
C806_00807
Hypothetical protein.
 
     0.765
C806_01516
Hypothetical protein.
 
     0.765
C806_04869
Hypothetical protein.
 
     0.765
C806_05078
Hypothetical protein.
 
     0.765
C806_00806
Phi13 family phage major tail protein.
 
     0.757
C806_00767
Phi13 family phage major tail protein.
 
     0.756
C806_05077
Phi13 family phage major tail protein.
 
     0.756
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.