STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_04870Phi13 family phage major tail protein. (208 aa)    
Predicted Functional Partners:
C806_04869
Hypothetical protein.
 
     0.947
C806_04871
Hypothetical protein.
 
     0.947
C806_04872
Hypothetical protein.
 
     0.947
C806_04873
Hypothetical protein.
 
     0.947
C806_04868
Hypothetical protein.
 
     0.944
C806_04874
Hypothetical protein.
 
     0.940
C806_04866
Hypothetical protein.
 
     0.897
C806_04867
Phage tail tape measure protein, TP901 family, core region.
 
     0.892
C806_00765
Hypothetical protein.
 
     0.781
C806_00804
Hypothetical protein.
 
     0.781
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.