STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_04890Hypothetical protein. (354 aa)    
Predicted Functional Partners:
C806_04891
Hypothetical protein.
       0.732
C806_00588
Hypothetical protein.
  
 
 0.574
C806_00590
Hypothetical protein.
  
 
 0.574
C806_04452
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.553
C806_00748
Site-specific DNA-methyltransferase (adenine-specific); Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.533
C806_01492
Hypothetical protein.
  
 
 0.533
C806_04936
Hypothetical protein.
  
 
 0.533
C806_04974
Hypothetical protein.
  
 
 0.533
C806_00081
Hypothetical protein.
   
   0.508
C806_00335
ParB-like partition protein; Belongs to the ParB family.
   
   0.508
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.