STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_05009Hypothetical protein. (226 aa)    
Predicted Functional Partners:
C806_00457
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 0.884
C806_05010
Hypothetical protein.
 
  
  0.879
C806_05008
Hypothetical protein.
       0.773
priA
Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
     
  0.724
C806_01223
Hypothetical protein; Belongs to the bacterial histone-like protein family.
    
 0.655
C806_01918
DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family.
    
 0.655
C806_04102
Hypothetical protein; Belongs to the bacterial histone-like protein family.
    
 0.655
C806_04907
Phage/plasmid primase, P4 family domain-containing protein.
 
  
  0.655
C806_00610
ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family.
 
 
  0.651
C806_04132
Hypothetical protein.
    
 0.643
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.