STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_05049Hypothetical protein. (626 aa)    
Predicted Functional Partners:
C806_05048
Hypothetical protein.
 
     0.688
C806_04985
Hypothetical protein.
  
     0.636
C806_03910
Hypothetical protein.
  
     0.621
C806_04235
Hypothetical protein.
  
     0.620
C806_05039
Hypothetical protein.
  
     0.606
C806_05050
Hypothetical protein.
 
    0.583
C806_05040
Hypothetical protein.
  
     0.553
C806_04234
Hypothetical protein.
  
     0.547
C806_03911
Hypothetical protein.
  
     0.540
C806_01583
Hypothetical protein.
  
     0.524
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.