STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_05070ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Belongs to the peptidase S14 family. (263 aa)    
Predicted Functional Partners:
C806_01688
ATP-dependent Clp protease, ATP-binding subunit ClpX.
 
 0.936
C806_04468
Hypothetical protein; Belongs to the ClpA/ClpB family.
  
 0.930
clpX
ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
 
 0.928
C806_03902
Hypothetical protein.
 
 0.924
clpB
ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
   
 0.917
C806_05069
HK97 family phage portal protein.
 
    0.893
C806_05071
HK97 family phage major capsid protein.
 
    0.839
C806_04062
Hypothetical protein.
  
 
 0.706
C806_05073
Hypothetical protein.
  
    0.688
C806_05072
Hypothetical protein.
       0.684
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.