STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_00154Hypothetical protein. (217 aa)    
Predicted Functional Partners:
C810_01873
Hypothetical protein.
 
  
 0.767
C810_05255
Hypothetical protein.
 
  
 0.766
C810_00147
Hypothetical protein.
 
  
 0.755
C810_02976
Acetolactate synthase, small subunit.
  
    0.532
C810_01836
Propionaldehyde dehydrogenase.
  
 
 0.499
C810_01312
Acetolactate synthase, small subunit.
   
    0.471
C810_01590
Acetolactate synthase, small subunit.
   
    0.471
C810_03241
Hypothetical protein.
   
    0.471
prmC
protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
   
   0.467
C810_03430
Hypothetical protein.
   
   0.464
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.