STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_00161Hypothetical protein. (240 aa)    
Predicted Functional Partners:
C810_03477
Hypothetical protein.
 
 0.901
C810_00162
Hypothetical protein.
 
    0.894
C810_03924
Hypothetical protein.
  
    0.780
C810_03215
Hypothetical protein.
 
 
  0.740
C810_04864
Hypothetical protein.
 
 
  0.730
C810_00163
Hypothetical protein.
       0.723
C810_00171
Hypothetical protein.
  
  
  0.690
C810_04391
Hypothetical protein.
  
    0.680
C810_05066
Hypothetical protein.
 
 
  0.678
C810_03747
Hypothetical protein.
  
  
  0.677
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.