STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_00237Hypothetical protein. (272 aa)    
Predicted Functional Partners:
C810_00672
Transketolase; Overlaps another CDS with the same product name.
 0.998
C810_00236
Hypothetical protein.
 
 0.997
C810_05069
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.944
C810_04948
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.935
C810_00234
Hypothetical protein.
 
     0.830
C810_00233
Hypothetical protein.
 
     0.812
fcl
Hypothetical protein; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
       0.785
C810_00766
PTS system, beta-glucoside-specific IIABC component.
    
  0.782
C810_00769
PTS system, glucose subfamily, IIA component.
    
  0.782
C810_01180
PTS system, sucrose-specific IIBC component.
    
  0.782
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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