Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_00348Hypothetical protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (313 aa)    
Predicted Functional Partners:
C810_03905
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.981
C810_04948
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.966
C810_03050
NADH-quinone oxidoreductase subunit F.
   
 
 0.898
C810_05259
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase.
    
  0.881
C810_01867
Glycolate oxidase, subunit GlcD.
 
 
 0.867
C810_01072
Hypothetical protein.
 
 0.839
C810_05108
Hypothetical protein.
 
 
 0.837
C810_04036
Lactoylglutathione lyase.
  
 0.822
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 0.816
C810_04967
Threonine ammonia-lyase.
 
 
 0.816
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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