Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_00486Hypothetical protein. (91 aa)    
Predicted Functional Partners:
C810_00485
ParB-like partition protein; Belongs to the ParB family.
 
     0.897
C810_00484
Chromosome partitioning protein.
 
     0.829
C810_00491
Hypothetical protein.
 
     0.825
C810_00488
Hypothetical protein.
 
     0.766
C810_04309
Hypothetical protein.
  
     0.757
C810_00619
Hypothetical protein.
  
     0.746
C810_00620
Hypothetical protein.
  
     0.722
C810_00487
Hypothetical protein.
       0.718
C810_00538
Hypothetical protein.
  
     0.712
C810_00557
Hypothetical protein.
  
     0.704
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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