Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_00530Hypothetical protein. (144 aa)    
Predicted Functional Partners:
C810_04686
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 0.866
C810_00531
Hypothetical protein.
 
     0.847
C810_04543
Hypothetical protein.
 
    0.772
C810_00798
Hypothetical protein.
 
    0.759
C810_05280
Hypothetical protein.
 
     0.746
C810_05283
Hypothetical protein.
 
     0.745
C810_02436
Phage/plasmid primase, P4 family domain-containing protein.
     
  0.734
C810_03554
Hypothetical protein.
 
 
  0.734
C810_04579
Phage/plasmid primase, P4 family domain-containing protein.
     
  0.734
C810_05281
Hypothetical protein.
 
    0.672
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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