STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_00541Hypothetical protein. (582 aa)    
Predicted Functional Partners:
C810_00545
Hypothetical protein.
 
  
  0.937
C810_00546
Hypothetical protein.
 
     0.876
C810_00543
Hypothetical protein.
 
  
 0.871
C810_00544
Hypothetical protein.
  
 
0.859
C810_00542
Hypothetical protein.
 
    
0.817
C810_00540
MATE efflux family protein.
 
  
  0.805
dnaK
Chaperone dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.754
C810_00539
Hypothetical protein.
       0.741
C810_02315
ABC-type bacteriocin transporter.
   
  0.708
C810_00808
Hypothetical protein.
   
 0.654
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.