STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_00615Hypothetical protein. (197 aa)    
Predicted Functional Partners:
C810_00616
Hypothetical protein.
 
   
 0.951
C810_00618
Hypothetical protein.
 
   
 0.870
C810_00632
Hypothetical protein.
 
   
 0.793
C810_00619
Hypothetical protein.
 
     0.792
C810_02841
Hypothetical protein.
 
   
 0.790
C810_04310
Hypothetical protein.
 
   
 0.788
C810_00950
Hypothetical protein.
  
     0.603
C810_00617
Hypothetical protein.
       0.590
C810_00614
Transposase.
       0.464
C810_00613
Transposase.
       0.461
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.