STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araAL-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (499 aa)    
Predicted Functional Partners:
C810_00674
L-ribulose-5-phosphate 4-epimerase.
 
 
 0.995
C810_01013
L-ribulose-5-phosphate 4-epimerase.
 
 
 0.973
C810_00673
Hypothetical protein.
 
 
 0.925
C810_03920
Hypothetical protein.
 
 
 0.789
C810_00668
Hypothetical protein.
 
   
 0.762
C810_01752
Hypothetical protein.
  
  
  0.651
tal
Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
  
 0.581
C810_02032
Hypothetical protein; Belongs to the GHMP kinase family.
    
 0.570
xylB
Xylulokinase.
  
 
 0.567
C810_04161
Hypothetical protein.
  
 
 0.565
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.