Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_00754Hypothetical protein. (290 aa)    
Predicted Functional Partners:
C810_00753
Dipicolinic acid synthetase, B subunit.
 
  
 0.990
C810_05103
Asparagine synthase (glutamine-hydrolyzing).
 
    0.710
C810_02080
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.690
C810_00368
Stage V sporulation protein T.
  
   
 0.664
C810_02227
RNA polymerase sigma-E factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
     0.635
C810_02756
Sporulation integral membrane protein YlbJ.
  
   
 0.621
C810_00995
Hypothetical protein.
  
     0.614
C810_02135
Stage IV sporulation protein B.
  
     0.610
C810_02229
RNA polymerase sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
     0.610
C810_05014
YlmC/YmxH family sporulation protein.
 
     0.606
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
Server load: low (30%) [HD]