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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_00816Cysteine desulfurase. (381 aa)    
Predicted Functional Partners:
C810_04118
FeS cluster assembly scaffold protein NifU.
  
 0.995
C810_02986
Hypothetical protein.
  
 0.977
C810_00813
Hypothetical protein.
  
 0.961
C810_00814
Hypothetical protein.
 
     0.942
C810_00815
Hypothetical protein.
 
     0.942
C810_00819
DNA sulfur modification protein DndD.
 
  
 0.889
C810_00817
Hypothetical protein.
 
     0.887
C810_03006
Hypothetical protein.
 
 
 0.841
C810_03558
Hypothetical protein.
  
 
 0.802
C810_04297
Thioredoxin-disulfide reductase.
  
 
 0.802
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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