STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_00834Hypothetical protein. (142 aa)    
Predicted Functional Partners:
C810_00833
Hypothetical protein.
 
     0.768
C810_05123
Hypothetical protein.
   
    0.642
C810_03805
Hypothetical protein.
   
  
 0.606
C810_02287
Hypothetical protein.
  
    0.570
C810_00192
Hypothetical protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
   
    0.548
C810_03277
Hypothetical protein.
  
     0.543
C810_02822
Hypothetical protein.
  
     0.516
C810_00049
Hypothetical protein.
  
     0.509
C810_03276
Sigma-70 family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.496
C810_02962
YihY family inner membrane protein; Belongs to the UPF0761 family.
  
    0.483
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.