Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_00929Hypothetical protein. (333 aa)    
Predicted Functional Partners:
C810_00930
Hypothetical protein; Belongs to the small heat shock protein (HSP20) family.
  
    0.741
C810_02466
Hypothetical protein.
  
 
 0.701
C810_04838
Hypothetical protein.
  
 
 0.701
C810_03353
Glycosyltransferase.
 
 
 
 0.679
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
     
  0.661
C810_04718
Hypothetical protein.
     
  0.661
C810_00240
Hypothetical protein.
   
 
 0.638
C810_03827
Hypothetical protein.
   
 
 0.638
C810_00760
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
   
    0.620
C810_00928
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
 
    0.570
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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