STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_01263Hypothetical protein. (55 aa)    
Predicted Functional Partners:
C810_01262
Hypothetical protein.
 
     0.961
C810_01261
Phi13 family phage major tail protein.
 
     0.958
C810_01259
Hypothetical protein.
 
     0.957
C810_01258
Hypothetical protein.
 
     0.956
C810_01260
Hypothetical protein.
 
     0.956
C810_01257
Hypothetical protein.
 
     0.954
C810_01264
Phage tail tape measure protein, TP901 family, core region.
 
     0.913
C810_01256
HK97 family phage major capsid protein.
 
     0.776
C810_01255
ATP-dependent Clp protease, protease subunit.
 
     0.745
C810_01268
Hypothetical protein.
 
     0.674
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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