Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_01481Hypothetical protein. (63 aa)    
Predicted Functional Partners:
C810_01478
Hypothetical protein.
       0.773
C810_01479
Hypothetical protein.
       0.773
C810_01480
Hypothetical protein.
       0.773
C810_01477
Hypothetical protein.
       0.732
C810_01476
Hypothetical protein.
       0.702
C810_01475
Hypothetical protein.
       0.669
C810_01473
Hypothetical protein.
       0.656
C810_01474
Hypothetical protein.
       0.656
C810_01472
Hypothetical protein.
       0.626
C810_01471
Hypothetical protein.
       0.580
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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