Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_01482Hypothetical protein. (77 aa)    
Predicted Functional Partners:
C810_04948
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.887
C810_03634
Hypothetical protein.
  
     0.620
C810_03491
Hypothetical protein.
  
     0.595
C810_03547
Hypothetical protein.
 
     0.578
C810_01483
Hypothetical protein.
       0.544
C810_01484
Hypothetical protein.
       0.520
C810_03126
Hypothetical protein.
  
     0.515
C810_03490
Hypothetical protein.
  
     0.509
C810_00293
Hypothetical protein.
  
     0.502
C810_02686
Hypothetical protein.
  
     0.490
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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