Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
C810_01818 | C810_01819 | Hypothetical protein. | Hypothetical protein. | 0.950 |
C810_01818 | C810_03477 | Hypothetical protein. | Hypothetical protein. | 0.944 |
C810_01818 | C810_04283 | Hypothetical protein. | Hypothetical protein. | 0.834 |
C810_01818 | C810_04930 | Hypothetical protein. | Hypothetical protein. | 0.946 |
C810_01818 | C810_05119 | Hypothetical protein. | Hypothetical protein. | 0.754 |
C810_01819 | C810_01818 | Hypothetical protein. | Hypothetical protein. | 0.950 |
C810_01819 | C810_01883 | Hypothetical protein. | Hypothetical protein. | 0.839 |
C810_01819 | C810_02361 | Hypothetical protein. | Flagellar motor switch protein FliM. | 0.917 |
C810_01819 | C810_02362 | Hypothetical protein. | Flagellar motor switch protein FliN. | 0.915 |
C810_01819 | C810_02374 | Hypothetical protein. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.900 |
C810_01819 | C810_03477 | Hypothetical protein. | Hypothetical protein. | 0.833 |
C810_01819 | C810_04278 | Hypothetical protein. | Hypothetical protein. | 0.900 |
C810_01819 | C810_04283 | Hypothetical protein. | Hypothetical protein. | 0.907 |
C810_01819 | C810_04930 | Hypothetical protein. | Hypothetical protein. | 0.951 |
C810_01819 | C810_05119 | Hypothetical protein. | Hypothetical protein. | 0.969 |
C810_01883 | C810_01819 | Hypothetical protein. | Hypothetical protein. | 0.839 |
C810_01883 | C810_03477 | Hypothetical protein. | Hypothetical protein. | 0.578 |
C810_02361 | C810_01819 | Flagellar motor switch protein FliM. | Hypothetical protein. | 0.917 |
C810_02361 | C810_02362 | Flagellar motor switch protein FliM. | Flagellar motor switch protein FliN. | 0.999 |
C810_02361 | C810_02374 | Flagellar motor switch protein FliM. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.935 |
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