STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_01895ATP-binding cassette, subfamily B, bacterial. (613 aa)    
Predicted Functional Partners:
C810_01894
Hypothetical protein.
 
  
 
0.886
C810_00936
Hypothetical protein.
 
  
  0.812
C810_02315
ABC-type bacteriocin transporter.
 
 
 
0.798
C810_04167
Phosphonate C-P lyase system protein PhnL.
 
     
0.779
C810_01171
Hypothetical protein.
 
     
0.717
C810_01893
Hypothetical protein.
 
   
 0.639
C810_04570
Hypothetical protein.
 
     
0.628
C810_00721
Hypothetical protein.
  
  
 
0.493
C810_04096
ATP-binding cassette, subfamily B, bacterial; Overlaps another CDS with the same product name.
  
  
 
0.493
C810_00043
Hypothetical protein.
 
     
0.491
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
Server load: medium (80%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.