Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
potAPolyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (357 aa)    
Predicted Functional Partners:
C810_01946
Spermidine/putrescine transport system permease.
 
 0.999
C810_01947
Hypothetical protein.
 
 0.999
C810_01945
Hypothetical protein.
 
 0.998
C810_03144
ATP-binding cassette, subfamily B, bacterial.
 
   
 
0.895
C810_01949
Hypothetical protein.
 
 
 0.870
C810_04124
Zinc transport system permease.
     
 0.850
C810_01943
Oligopeptide transport system substrate-binding protein.
   
 
 0.847
C810_00722
ATP-binding cassette, subfamily B, bacterial.
 
   
 
0.843
C810_01790
Maltose/maltodextrin transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
  0.843
C810_03810
Hypothetical protein.
     
 0.835
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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