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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_02001RelE/StbE family addiction module toxin. (92 aa)    
Predicted Functional Partners:
C810_02000
RelB/DinJ family addiction module antitoxin.
 
 
 0.990
C810_02898
RelB/DinJ family addiction module antitoxin.
 
 
 0.947
C810_01964
RelB/DinJ family addiction module antitoxin.
 
 
 0.921
C810_01999
Hypothetical protein.
       0.701
C810_02002
tryptophan-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.682
C810_01998
Hypothetical protein.
       0.593
C810_02003
Hypothetical protein.
 
     0.563
C810_02004
Hypothetical protein.
 
     0.506
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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