Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_02073YegS//BmrU family lipid kinase. (309 aa)    
Predicted Functional Partners:
C810_04329
YegS//BmrU family lipid kinase.
  
  
  0.883
C810_02889
Hypothetical protein; Belongs to the CDS family.
    
 0.744
C810_03502
1-acylglycerol-3-phosphate O-acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.738
C810_02072
4-alpha-glucanotransferase.
       0.682
C810_04270
Hypothetical protein.
 
 
 0.636
C810_02074
Hypothetical protein.
       0.572
C810_02075
Hypothetical protein.
       0.572
C810_05017
Hypothetical protein.
   
 
  0.568
C810_03150
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
  
 0.560
C810_04929
Hypothetical protein.
    
  0.493
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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