Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_02095Stage III sporulation protein AE. (404 aa)    
Predicted Functional Partners:
C810_02094
Stage III sporulation protein AD.
 
  
 0.994
C810_02096
Stage III sporulation protein AF.
 
  
 0.994
C810_02097
Stage III sporulation protein AG.
 
  
 0.984
C810_02093
Stage III sporulation protein AC.
 
  
 0.977
C810_02092
Stage III sporulation protein AB.
 
  
 0.972
C810_02098
Hypothetical protein.
 
  
 0.970
C810_02091
Stage III sporulation protein AA.
 
  
 0.969
C810_02653
Hypothetical protein.
 
  
 0.909
C810_02080
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
 
  
 0.827
C810_03002
Stage II sporulation protein P.
  
   
 0.824
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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