STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_02096Stage III sporulation protein AF. (184 aa)    
Predicted Functional Partners:
C810_02094
Stage III sporulation protein AD.
 
  
 0.999
C810_02095
Stage III sporulation protein AE.
 
  
 0.992
C810_02097
Stage III sporulation protein AG.
 
  
 0.977
C810_02098
Hypothetical protein.
 
  
 0.945
C810_02093
Stage III sporulation protein AC.
 
  
 0.919
C810_02092
Stage III sporulation protein AB.
 
  
 0.917
C810_02091
Stage III sporulation protein AA.
 
  
 0.836
C810_02653
Hypothetical protein.
 
  
 0.828
C810_00728
CotS family spore coat protein.
  
     0.640
C810_04683
Hypothetical protein.
  
     0.629
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.