STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_02147Hypothetical protein. (122 aa)    
Predicted Functional Partners:
C810_02149
Heavy metal translocating P-type ATPase.
 
  
 0.914
C810_02148
Hypothetical protein.
 
  
 0.863
C810_02146
Hypothetical protein.
 
  
 0.815
C810_04917
Heavy metal translocating P-type ATPase.
 
  
 0.795
C810_04948
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.610
C810_02896
Heavy metal translocating P-type ATPase.
 
  
 0.577
C810_02145
Hypothetical protein.
     
 0.573
C810_02144
MATE efflux family protein.
       0.557
C810_03990
Hypothetical protein.
  
   
 0.527
birA
biotin-[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.510
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.