STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_02192Malate dehydrogenase (oxaloacetate-decarboxylating). (384 aa)    
Predicted Functional Partners:
C810_04912
Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type.
 
 0.981
C810_04948
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.976
C810_03905
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.971
C810_04484
Phosphate acetyltransferase.
 
 
 0.963
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 0.952
C810_04911
Hydrolyase, tartrate alpha subunit/fumarate domain-containing protein, Fe-S type.
 
 
 0.941
C810_03439
Citrate synthase; Belongs to the citrate synthase family.
  
 0.923
C810_02529
Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
  
 
 0.914
C810_02009
Sodium ion-translocating decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
    
 0.912
C810_02010
Oxaloacetate decarboxylase, alpha subunit.
    
 0.909
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.