Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C810_02192Malate dehydrogenase (oxaloacetate-decarboxylating). (384 aa)    
Predicted Functional Partners:
C810_04912
Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type.
 
 0.979
C810_04484
Phosphate acetyltransferase.
 
 
 0.968
C810_03905
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.967
C810_04948
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.959
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 0.937
C810_03050
NADH-quinone oxidoreductase subunit F.
  
 
 0.936
C810_04911
Hydrolyase, tartrate alpha subunit/fumarate domain-containing protein, Fe-S type.
 
 
 0.935
C810_02529
Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
  
 
 0.910
C810_03439
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.908
C810_00464
Aminotransferase.
  
 0.905
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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