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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_02206Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (328 aa)    
Predicted Functional Partners:
C810_00747
Hypothetical protein.
   
 0.931
C810_04145
Hypothetical protein.
 
  
 0.889
C810_04144
Hypothetical protein.
    
 0.872
C810_02795
Hypothetical protein.
    
 0.822
C810_02958
Hypothetical protein.
    
 0.822
C810_03151
Hypothetical protein; Belongs to the peptidase S8 family.
    
 0.822
C810_04240
Hypothetical protein.
    
 0.822
C810_04852
Hypothetical protein.
    
 0.822
C810_04140
Hypothetical protein.
 
  
 0.806
C810_01753
Hypothetical protein.
  
 
 0.796
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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