Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_02252Hypothetical protein. (75 aa)    
Predicted Functional Partners:
C810_04948
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 0.975
C810_03834
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.974
C810_03051
NADH-quinone oxidoreductase subunit E.
   
  0.947
C810_02251
Hypothetical protein.
 
  
  0.939
C810_02254
Hypothetical protein.
 
   
 0.933
C810_02257
Hypothetical protein.
   
 0.930
C810_02327
Malonyl CoA-acyl carrier protein transacylase.
  
 0.925
C810_02253
Hypothetical protein; Belongs to the membrane-bound acyltransferase family.
 
 0.924
C810_00329
Hypothetical protein.
 
 0.918
C810_03050
NADH-quinone oxidoreductase subunit F.
   
 0.914
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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