Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_02304Hypothetical protein. (215 aa)    
Predicted Functional Partners:
C810_04396
Hypothetical protein.
  
 0.931
C810_02206
Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.889
nanE
Hypothetical protein; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
     0.885
C810_01257
Hypothetical protein.
  
 0.883
C810_02302
N-acetylneuraminate lyase; Belongs to the DapA family.
 
  
 0.861
C810_04240
Hypothetical protein.
  
 0.732
C810_00430
Hypothetical protein.
  
   0.715
C810_03124
Hypothetical protein.
   
   0.711
C810_01435
Hypothetical protein.
   
 
 0.676
C810_05239
Hypothetical protein.
   
 
 0.676
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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