STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_02315ABC-type bacteriocin transporter. (717 aa)    
Predicted Functional Partners:
C810_03809
Hypothetical protein.
  
 0.979
C810_04416
Hypothetical protein.
  
 0.956
C810_04149
ATP-binding cassette, subfamily B, bacterial.
 
 
 
0.821
C810_04150
Hypothetical protein.
 
 
 
0.818
C810_03144
ATP-binding cassette, subfamily B, bacterial.
 
 
 
0.812
C810_03562
Hypothetical protein.
 
 
 
0.811
C810_00721
Hypothetical protein.
 
 
 
0.807
C810_00722
ATP-binding cassette, subfamily B, bacterial.
 
 
 
0.806
C810_03563
Hypothetical protein.
 
 
 
0.806
C810_02563
ATP-binding cassette, subfamily B, bacterial; Overlaps another CDS with the same product name.
 
 
 
0.804
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.