Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_02483Hypothetical protein. (289 aa)    
Predicted Functional Partners:
C810_03307
Hypothetical protein.
 
  
 0.861
C810_02224
Hypothetical protein.
  
   
 0.799
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.797
C810_04477
Hypothetical protein.
  
     0.756
C810_04670
Hypothetical protein.
 
 
   0.755
C810_03306
Hypothetical protein.
  
     0.752
C810_02864
Hypothetical protein.
  
     0.750
C810_02485
Hypothetical protein; Belongs to the SEDS family.
 
   
 0.748
C810_02708
Rod shape-determining protein MreD.
  
   
 0.748
C810_03014
Hypothetical protein.
  
     0.740
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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