STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_02491Hypothetical protein. (118 aa)    
Predicted Functional Partners:
C810_02492
DAK2 domain fusion protein YloV.
 
  
 0.991
C810_02493
ATP-dependent DNA helicase RecG.
       0.799
C810_01564
DegV family EDD domain-containing protein.
 
    0.671
C810_02752
DegV family EDD domain-containing protein.
 
    0.621
C810_02174
DegV family EDD domain-containing protein.
 
    0.587
C810_02497
Hypothetical protein; Belongs to the UPF0297 family.
  
  
 0.585
C810_01788
Hypothetical protein.
   
    0.453
rpsT
Ribosomal protein S20; Binds directly to 16S ribosomal RNA.
   
    0.403
C810_04701
Hypothetical protein.
  
     0.402
C810_02757
Hypothetical protein.
 
     0.400
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.