STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_02506Hypothetical protein. (351 aa)    
Predicted Functional Partners:
C810_02504
Hypothetical protein.
    
  0.894
C810_02503
Hypothetical protein.
 
     0.873
C810_02505
Hypothetical protein.
       0.790
cutC
Hypothetical protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
    0.698
C810_02502
Hypothetical protein; Belongs to the UPF0342 family.
       0.581
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
     
 0.575
C810_00348
Hypothetical protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
  0.559
rnj
Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.543
C810_05038
Hypothetical protein.
  
    0.538
C810_05257
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
  
  0.518
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.