Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_02540ParB-like partition protein; Belongs to the ParB family. (284 aa)    
Predicted Functional Partners:
C810_02539
Hypothetical protein.
 
  
  0.939
C810_02388
Chromosome partitioning protein.
 
   0.777
C810_04637
Chromosome partitioning protein.
 
   0.777
C810_00484
Chromosome partitioning protein.
 
   0.776
C810_02593
Hypothetical protein.
 
  
  0.750
C810_02543
Hypothetical protein.
 
     0.738
C810_00124
Chromosome partitioning protein.
 
   0.737
C810_03664
Hypothetical protein.
 
  
  0.709
C810_04835
Chromosome partitioning protein.
 
   0.679
C810_02592
Hypothetical protein.
 
  
  0.673
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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