Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_02691Hypothetical protein; Belongs to the membrane-bound acyltransferase family. (472 aa)    
Predicted Functional Partners:
C810_02692
Hypothetical protein.
 
  
  0.904
C810_02528
Hypothetical protein.
 
  
  0.821
C810_02690
Hypothetical protein.
       0.642
C810_03863
Hypothetical protein.
  
 0.597
C810_02252
Hypothetical protein.
  
 0.596
C810_03824
D-alanine-poly(phosphoribitol) ligase, subunit 2.
  
 0.596
C810_03836
Acyl carrier protein.
  
 0.596
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.592
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.592
C810_02693
Hypothetical protein.
       0.553
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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