Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_02802Hypothetical protein. (376 aa)    
Predicted Functional Partners:
C810_02803
Hypothetical protein.
 
   
 0.948
C810_00808
Hypothetical protein.
   
 0.872
dnaK
Chaperone dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.872
C810_00262
Hypothetical protein.
   
 0.834
C810_04461
Hypothetical protein.
   
 0.834
C810_02345
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
 
 0.785
C810_02804
Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
       0.773
C810_04930
Hypothetical protein.
   
 0.728
C810_01682
histidine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.
    
  0.727
C810_04283
Hypothetical protein.
    
 0.699
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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