Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C810_02899txe/YoeB family addiction module toxin. (87 aa)    
Predicted Functional Partners:
C810_00679
Prevent-host-death family protein.
  
 0.941
C810_02898
RelB/DinJ family addiction module antitoxin.
 
  
 0.927
C810_03966
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 0.884
C810_02001
RelE/StbE family addiction module toxin.
    
 0.730
C810_02952
AbrB family transcriptional regulator.
     
 0.717
C810_04684
Hypothetical protein.
     
 0.714
C810_01964
RelB/DinJ family addiction module antitoxin.
 
  
 0.705
C810_02000
RelB/DinJ family addiction module antitoxin.
    
 0.618
C810_01568
Hypothetical protein.
     
 0.614
C810_02472
Hypothetical protein.
     
 0.614
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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