STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_03051NADH-quinone oxidoreductase subunit E. (167 aa)    
Predicted Functional Partners:
C810_03049
[FeFe] hydrogenase, group A.
 0.999
C810_03050
NADH-quinone oxidoreductase subunit F.
 0.999
C810_04948
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 0.995
C810_04682
Ferredoxin.
  
 0.983
C810_01919
Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
     
 0.976
C810_02279
[FeFe] hydrogenase, group B1/B3.
 
 0.975
C810_03918
Hypothetical protein.
 
 
 0.948
C810_02252
Hypothetical protein.
   
 0.941
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.941
C810_03824
D-alanine-poly(phosphoribitol) ligase, subunit 2.
   
 0.941
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.