Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_03152Hypothetical protein. (748 aa)    
Predicted Functional Partners:
C810_01880
Hypothetical protein.
 
 
 0.796
C810_03165
Hypothetical protein.
 
 
 0.745
C810_02153
Hypothetical protein.
 
  
 0.743
C810_04931
Hypothetical protein; Belongs to the glycosyl hydrolase 31 family.
    
 0.694
C810_00742
Hypothetical protein; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.680
C810_00382
Hypothetical protein; Converts alpha-aldose to the beta-anomer.
  
 
 0.679
C810_01178
Hypothetical protein.
 
  
 0.679
C810_03153
Cof-like hydrolase.
  
    0.669
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
     
 0.652
C810_04100
Hypothetical protein; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.611
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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