STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_03229Hypothetical protein. (215 aa)    
Predicted Functional Partners:
C810_03047
MATE efflux family protein.
  
     0.766
C810_02144
MATE efflux family protein.
  
     0.758
C810_02821
MATE efflux family protein.
  
     0.746
C810_00048
MATE efflux family protein.
  
     0.743
C810_03048
Hypothetical protein.
  
     0.719
C810_04432
MATE efflux family protein.
  
     0.702
C810_02478
MATE efflux family protein.
  
     0.697
C810_00384
MATE efflux family protein.
  
     0.695
C810_00752
MATE efflux family protein.
  
   
 0.498
C810_01787
Hypothetical protein.
  
  
 0.492
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.