STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_03342UDP-N-acetylglucosamine 4,6-dehydratase. (330 aa)    
Predicted Functional Partners:
C810_03351
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.964
C810_03344
Pseudaminic acid synthase.
 
 
 0.918
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
    
 0.901
C810_03347
Pseudaminic acid biosynthesis-associated protein PseG.
 
   
 0.891
C810_03341
Hypothetical protein.
 
   
 0.866
C810_03803
Hypothetical protein.
  
 
 0.861
C810_03896
Hypothetical protein.
  
 
 0.861
C810_03349
Hypothetical protein.
 
   
 0.835
C810_03809
Hypothetical protein.
  
 
 0.834
C810_05093
Hypothetical protein.
 
 
 0.830
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.