Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_03418Hypothetical protein. (349 aa)    
Predicted Functional Partners:
C810_03419
Hypothetical protein.
     0.976
C810_02545
Hypothetical protein.
     0.911
C810_04030
Hypothetical protein.
     0.892
C810_03420
DNA (cytosine-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
 
     0.869
C810_03421
Hypothetical protein.
 
     0.815
C810_03417
Hypothetical protein.
 
     0.775
C810_03401
Hypothetical protein.
  
     0.755
C810_03400
Hypothetical protein.
 
     0.737
C810_00570
Hypothetical protein.
  
     0.723
C810_01094
Hypothetical protein.
 
     0.702
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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